Package: RHISEA
Type: Package
Title: An R package for flexible and reproducible mixed-stock analysis
        in fisheries and ecology
Version: 0.1.0
Authors@R: 
    c(person("Sosthene", "A. V. Akia", 
             email = "sosthene.akia@dfo-mpo.gc.ca", 
             role = c("aut", "cre", "cph"),
             comment = "Fisheries and Oceans Canada, Gulf Fisheries Centre"),
      person("Alex", "Hanke", 
             email = "alex.hanke@dfo-mpo.gc.ca", 
             role = c("aut", "cph"),
             comment = "Fisheries and Oceans Canada, St. Andrews Biological Station"))
Maintainer: Sosthene A. V. Akia <sosthene.akia@dfo-mpo.gc.ca>
Description: RHISEA modernizes Millar's HISEA (1987,1990) methodology
        for reproducible mixed-stock analysis. RHISEA provides a
        flexible and reproducible framework for mixed-stock analysis in
        fisheries and ecology. Modernizes legacy workflows by
        integrating modern statistical classifiers (LDA, RF, MCLUST,
        SVM, etc.) and estimators (EM, ML, COOK). Includes simulation
        frameworks, bootstrap resampling, and complete analysis
        workflows for fisheries stock assessment and population
        structure inference.
License: GPL-3
Encoding: UTF-8
RoxygenNote: 7.3.3
Depends: R (>= 3.5.0)
Imports: stats, utils, MASS, data.table, ggplot2, tidyr, caret,
        xgboost, randomForest, nnet, e1071, mclust, class, kknn
SystemRequirements: Windows (for the included hisea.exe binary)
Suggests: testthat (>= 3.0.0), roxygen2, knitr, rmarkdown, covr, readr,
        dplyr
VignetteBuilder: knitr
URL: https://github.com/SostheneA/RHISEA,
        https://sosthenea.github.io/RHISEA/
BugReports: https://github.com/SostheneA/RHISEA/issues
Config/testthat/edition: 3
LazyData: true
Repository: https://sosthenea.r-universe.dev
Date/Publication: 2026-03-17 18:29:01 UTC
RemoteUrl: https://github.com/SostheneA/RHISEA
RemoteRef: HEAD
RemoteSha: 7752da424d88030c7520ea3c42df5e17030d6b1b
NeedsCompilation: no
Packaged: 2026-07-15 05:53:08 UTC; root
Author: Sosthene A. V. Akia [aut, cre, cph] (Fisheries and Oceans Canada, Gulf
    Fisheries Centre),
  Alex Hanke [aut, cph] (Fisheries and Oceans Canada, St. Andrews
    Biological Station)